Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.3390/biology3010085
https://doi.org/10.3390/biology3010085
Cited by: 17
Author(s): Frank Krämer, Michaela Bayerlová, Tim Beißbarth
Published: over 10 years ago
Software Mentions 28
bioconductor: AnnotationDbi
Manipulation of SQLite-based annotations in BioconductorPapers that mentioned: 73
bioconductor: CAMERA
Collection of annotation related methods for mass spectrometry dataPapers that mentioned: 429
bioconductor: graphite
GRAPH Interaction from pathway Topological EnvironmentPapers that mentioned: 30
bioconductor: KEGGgraph
KEGGgraph: A graph approach to KEGG PATHWAY in R and BioconductorPapers that mentioned: 39
bioconductor: pathview
a tool set for pathway based data integration and visualizationPapers that mentioned: 144
bioconductor: PSICQUIC
Papers that mentioned: 75bioconductor: RedeR
Interactive visualization and manipulation of nested networksPapers that mentioned: 21
bioconductor: Rgraphviz
Provides plotting capabilities for R graph objectsPapers that mentioned: 33
bioconductor: SPIA
Signaling Pathway Impact Analysis (SPIA) using combined evidence of pathway over-representation and unusual signaling perturbationsPapers that mentioned: 155