Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: gaggle

https://packages.ecosyste.ms/registries/bioconductor.org/packages/gaggle

Broadcast data between R and Gaggle
1 version
Latest release: about 1 year ago
30,282 downloads total

Papers Mentioning gaggle 5

10.3390/metabo9100200

The metaRbolomics Toolbox in Bioconductor and beyond
Cited by: 61
Author(s): Jan Stanstrup, Corey D. Broeckling, Rick Helmus, Nils Hoffmann, Ewy A. Mathé, Thomas Naake, Luca Nicolotti, Kristian Peters, Johannes Michael Rainer, Reza M. Salek, Tobias Schulze, Emma L. Schymanski, Michael A. Stravs, Etienne Thévenot, Hendrik Treutler, Ralf Weber, Egon Willighagen, Michael Witting, Steffen Neumann
Software Mentions: 92
Published: about 5 years ago

10.3390/biology3010085

R-Based Software for the Integration of Pathway Data into Bioinformatic Algorithms
Cited by: 17
Author(s): Frank Krämer, Michaela Bayerlová, Tim Beißbarth
Software Mentions: 28
Published: almost 11 years ago

10.1186/s12918-015-0174-y

SEEK: a systems biology data and model management platform
Cited by: 79
Author(s): Katy Wolstencroft, Stuart Owen, Olga Krebs, Quyen Le Hoang Thuy To Nguyen, Natalie J. Stanford, Martin Golebiewski, Andreas Weidemann, Meik Bittkowski, Lin An, David Shockley, Jacky L. Snoep, Wolfgang Mueller, Carole Goble
Software Mentions: 5
Published: over 9 years ago

10.1371/journal.pcbi.1002228

Comparative Microbial Modules Resource: Generation and Visualization of Multi-species Biclusters
Cited by: 7
Author(s): Thadeous J. Kacmarczyk, Peter Waltman, Ashley R. Bate, Patrick Eichenberger, Richard Bonneau
Software Mentions: 5
Published: almost 13 years ago

10.1186/1471-2105-7-176

The Gaggle: An open-source software system for integrating bioinformatics software and data sources
Cited by: 149
Author(s): Paul Shannon, David J Reiss, Richard Bonneau, Nitin S. Baliga
Software Mentions: 4
Published: over 18 years ago