Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fdata.2021.725095

https://doi.org/10.3389/fdata.2021.725095

NPARS—A Novel Approach to Address Accuracy and Reproducibility in Genomic Data Science

Cited by: 2
Author(s): Li Ma, Erich A. Peterson, Ik Jae Shin, Jason Muesse, Katy Marino, Matthew A. Steliga, Donald J. Johann
Published: almost 3 years ago

Software Mentions 6

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: IsoformSwitchAnalyzeR
Identify, Annotate and Visualize Isoform Switches with Functional Consequences from both short- and long-read RNA-seq data
Papers that mentioned: 16
cran: RCircos
Circos 2D Track Plot
Papers that mentioned: 74
cran: RSQLite
SQLite Interface for R
Papers that mentioned: 27
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: scikit-learn
A set of python modules for machine learning and data mining
Papers that mentioned: 2,431