Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fcimb.2020.600325

https://doi.org/10.3389/fcimb.2020.600325

Single-Nucleotide RNA Maps for the Two Major Nosocomial Pathogens Enterococcus faecalis and Enterococcus faecium

Cited by: 12
Author(s): Charlotte Michaux, Elisabeth E Hansen, Laura Jenniches, Milan Gerovac, Lars Barquist, Jörg Vogel
Published: almost 4 years ago

Software Mentions 5

pypi: ANNOgesic
ANNOgesic - A tool for bacterial/archaeal RNA-Seq based genome annotations
Papers that mentioned: 8
pypi: deepTools
Useful tools for exploring deep sequencing data.
Papers that mentioned: 435
pypi: hmmer
HMMER binaries.
Papers that mentioned: 196
pypi: READemption
A RNA-Seq Analysis Pipeline
Papers that mentioned: 35
pypi: ViennaRNA
A library for the prediction and comparison of RNA secondary structures.
Papers that mentioned: 200