Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.18632/aging.203353

https://doi.org/10.18632/aging.203353

Cited by: 7
Author(s): Ranran Zhou, Jingjing Liang, Qi Chen, Haijun Tian, Cheng Yang, Cundong Liu
Published: almost 3 years ago

Software Mentions 14

bioconductor: clusterProfiler
A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223
bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: maftools
Summarize, Analyze and Visualize MAF Files
Papers that mentioned: 288
bioconductor: monocle
Clustering, differential expression, and trajectory analysis for single- cell RNA-Seq
Papers that mentioned: 60
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: glmnet
Lasso and Elastic-Net Regularized Generalized Linear Models
Papers that mentioned: 1,607
cran: rms
Regression Modeling Strategies
Papers that mentioned: 1,236
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
cran: survival
Survival Analysis
Papers that mentioned: 1,690
pypi: glmnet
Python wrapper for glmnet
Papers that mentioned: 1,607
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893
pypi: monocle
An async programming framework with a blocking look-alike syntax
Papers that mentioned: 60
pypi: survival
Add static script_dir() method to Path
Papers that mentioned: 1,690