An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.15252/msb.202010108

https://doi.org/10.15252/msb.202010108

Joint cell segmentation and cell type annotation for spatial transcriptomics

Cited by: 40
Author(s): Russell Littman, Zachary Hemminger, Robert T. Foreman, Douglas Arneson, Guanglin Zhang, Fernando Gómez‐Pinilla, Xia Yang, Roy Wollman
Published: about 4 years ago

Software Mentions 10

cran: tensorflow
R Interface to 'TensorFlow'
Papers that mentioned: 71
Very Likely Science (100)
pypi: custom
Custom self carry
Papers that mentioned: 1,363
Very Likely Science (65)
pypi: matplotlib
Python plotting package
Papers that mentioned: 1,045
Very Likely Science (100)
pypi: numpy
Fundamental package for array computing in Python
Papers that mentioned: 832
Very Likely Science (100)
pypi: pandas
Powerful data structures for data analysis, time series, and statistics
Papers that mentioned: 640
Very Likely Science (100)
pypi: pciSeq
Probabilistic cell typing for spatial transcriptomics
Papers that mentioned: 3
Very Likely Science (71)
pypi: scipy
Fundamental algorithms for scientific computing in Python
Papers that mentioned: 1,071
Very Likely Science (100)
pypi: seaborn
Statistical data visualization
Papers that mentioned: 283
Very Likely Science (100)
pypi: skimage
Dummy package that points to scikit-image
Papers that mentioned: 26
Very Likely Science (100)
pypi: tensorflow
TensorFlow is an open source machine learning framework for everyone.
Papers that mentioned: 71
Very Likely Science (90)