Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0224750

https://doi.org/10.1371/journal.pone.0224750

Gene expression microarray public dataset reanalysis in chronic obstructive pulmonary disease

Cited by: 3
Author(s): Lavida R. K. Rogers, Madison Verlinde, George I. Mias
Published: about 5 years ago

Software Mentions 10

bioconductor: affy
Methods for Affymetrix Oligonucleotide Arrays
Papers that mentioned: 989
bioconductor: affycoretools
Functions useful for those doing repetitive analyses with Affymetrix GeneChips
Papers that mentioned: 36
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: oligo
Preprocessing tools for oligonucleotide arrays
Papers that mentioned: 204
bioconductor: qvalue
Q-value estimation for false discovery rate control
Papers that mentioned: 248
bioconductor: ReactomePA
Reactome Pathway Analysis
Papers that mentioned: 171
bioconductor: sva
Surrogate Variable Analysis
Papers that mentioned: 511
cran: lawstat
Tools for Biostatistics, Public Policy, and Law
Papers that mentioned: 45
cran: nlme
Linear and Nonlinear Mixed Effects Models
Papers that mentioned: 3,265
pypi: oligo
UNOFFICIAL Python client for i-DE
Papers that mentioned: 204