Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0147221

https://doi.org/10.1371/journal.pone.0147221

Comprehensive Annotation of the Parastagonospora nodorum Reference Genome Using Next-Generation Genomics, Transcriptomics and Proteogenomics

Cited by: 36
Author(s): Robert A. Syme, Kar‐Chun Tan, James K. Hane, Kejal N Dodhia, Thomas Stoll, Marcus L. Hastie, Eiko Furuki, Simon R. Ellwood, Angela H. Williams, Yew‐Foon Tan, Alison C. Testa, Jeffrey J. Gorman, Richard P. Oliver
Published: almost 9 years ago

Software Mentions 4

bioconductor: MIRA
Methylation-Based Inference of Regulatory Activity
Papers that mentioned: 856
pypi: engine
Pure python extensible SQL database engine supporting NULL values. Formally SnakeSQL.
Papers that mentioned: 732
pypi: goatools
Python scripts to find enrichment of GO terms
Papers that mentioned: 24
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017