An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1371/journal.pone.0095224

https://doi.org/10.1371/journal.pone.0095224

Two-Stage, In Silico Deconvolution of the Lymphocyte Compartment of the Peripheral Whole Blood Transcriptome in the Context of Acute Kidney Allograft Rejection

Cited by: 18
Author(s): Casey P. Shannon, Robert Balshaw, Raymond T. Ng, J. Wilson-McManus, Paul Keown, Robert McMaster, Bruce M. McManus, David Landsberg, Nicole M. Isbel, Greg Knoll, Scott J. Tebbutt
Published: over 11 years ago

Software Mentions 9

bioconductor: affy
Methods for Affymetrix Oligonucleotide Arrays
Papers that mentioned: 989
Very Likely Science (98)
bioconductor: affyPLM
Methods for fitting probe-level models
Papers that mentioned: 162
Very Likely Science (100)
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
Very Likely Science (78)
cran: csSAM
Papers that mentioned: 13
Unlikely Science (0)
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
Very Likely Science (100)
cran: glmnet
Lasso and Elastic-Net Regularized Generalized Linear Models
Papers that mentioned: 1,607
Very Likely Science (100)
cran: limSolve
Solving Linear Inverse Models
Papers that mentioned: 16
Very Likely Science (75)
cran: samr
SAM: Significance Analysis of Microarrays
Papers that mentioned: 114
Very Likely Science (93)
pypi: glmnet
Python wrapper for glmnet
Papers that mentioned: 1,607
Very Likely Science (100)