Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1371/journal.pcbi.1004873
https://doi.org/10.1371/journal.pcbi.1004873
CNVkit: Genome-Wide Copy Number Detection and Visualization from Targeted DNA Sequencing
Cited by: 1,141
Author(s): Eric Talevich, A. Hunter Shain, Thomas Botton, Boris C. Bastian
Published: over 8 years ago
Software Mentions 9
bioconductor: CODEX
A Normalization and Copy Number Variation Detection Method for Whole Exome SequencingPapers that mentioned: 72
bioconductor: CopywriteR
Copy number information from targeted sequencing using off-target readsPapers that mentioned: 28
bioconductor: exomeCopy
Copy number variant detection from exome sequencing read depthPapers that mentioned: 7
bioconductor: GenomicRanges
Representation and manipulation of genomic intervalsPapers that mentioned: 323
pypi: CNVkit
Copy number variation toolkit for high-throughput sequencing.Papers that mentioned: 161