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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1371/journal.pcbi.1003806

https://doi.org/10.1371/journal.pcbi.1003806

OpenCyto: An Open Source Infrastructure for Scalable, Robust, Reproducible, and Automated, End-to-End Flow Cytometry Data Analysis

Cited by: 171
Author(s): Greg Finak, Jacob Frelinger, Wenxin Jiang, Evan W. Newell, John Ramey, Mark M. Davis, Spyros A. Kalams, Stephen C. De Rosa, Raphaël Gottardo
Published: almost 11 years ago

Software Mentions 8

bioconductor: flowClust
Clustering for Flow Cytometry
Papers that mentioned: 33
Very Likely Science (90)
bioconductor: flowCore
flowCore: Basic structures for flow cytometry data
Papers that mentioned: 109
Very Likely Science (75)
bioconductor: flowStats
Statistical methods for the analysis of flow cytometry data
Papers that mentioned: 19
Very Likely Science (100)
bioconductor: flowUtils
Papers that mentioned: 4
Unlikely Science (0)
bioconductor: flowViz
Visualization for flow cytometry
Papers that mentioned: 26
Very Likely Science (100)
bioconductor: flowWorkspace
Infrastructure for representing and interacting with gated and ungated cytometry data sets.
Papers that mentioned: 15
Very Likely Science (75)
bioconductor: ncdfFlow
ncdfFlow: A package that provides HDF5 based storage for flow cytometry data.
Papers that mentioned: 4
Very Likely Science (75)
bioconductor: openCyto
Hierarchical Gating Pipeline for flow cytometry data
Papers that mentioned: 11
Very Likely Science (75)