Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.12688/f1000research.20887.3

https://doi.org/10.12688/f1000research.20887.3

RCy3: Network biology using Cytoscape from within R

Cited by: 72
Author(s): Julia Gustavsen, Shraddha Pai, Ruth Isserlin, Barry Demchak, Alexander R. Pico
Published: almost 5 years ago

Software Mentions 6

bioconductor: BioNet
Routines for the functional analysis of biological networks
Papers that mentioned: 40
bioconductor: EnrichmentBrowser
Seamless navigation through combined results of set-based and network-based enrichment analysis
Papers that mentioned: 12
bioconductor: RBGL
An interface to the BOOST graph library
Papers that mentioned: 18
bioconductor: RCy3
Functions to Access and Control Cytoscape
Papers that mentioned: 22
cran: igraph
Network Analysis and Visualization
Papers that mentioned: 1,555
pypi: igraph
High performance graph data structures and algorithms
Papers that mentioned: 1,555