Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.12688/f1000research.12974.1

https://doi.org/10.12688/f1000research.12974.1

Using bio.tools to generate and annotate workbench tool descriptions

Cited by: 8
Author(s): Kenzo-Hugo Hillion, Ivan Kuzmin, Anton Khodak, Helena Rasche, Michael R. Crusoe, Hedi Peterson, Jon C. Ison, Hervé Ménager
Published: almost 7 years ago

Software Mentions 8

pypi: argparse2tool

Instrument for forming Galaxy XML and CWL tool descriptions from argparse arguments
Papers that mentioned: 1

pypi: bio

bio
Papers that mentioned: 18

pypi: cwlgen

Generation of CWL programmatically. Available types: Workflow, CommandLineTool and Requirements
Papers that mentioned: 1

pypi: galaxyxml

Galaxy XML generation library
Papers that mentioned: 1

pypi: github

An asynchronous python wrapper around the GitHub API
Papers that mentioned: 57

pypi: Integration

A simple program to perfom integration
Papers that mentioned: 42

pypi: tools

Set of tools for web scraping projects
Papers that mentioned: 118

pypi: workbench

A scalable framework for security research and development teams.
Papers that mentioned: 139