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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1186/s40793-020-00365-8

https://doi.org/10.1186/s40793-020-00365-8

Seasonal dynamics in taxonomy and function within bacterial and viral metagenomic assemblages recovered from a freshwater agricultural pond

Cited by: 14
Author(s): Jessica Chopyk, Daniel J. Nasko, Sarah Allard, Anthony Bui, Mihai Pop, Emmanuel F. Mongodin, Amy R. Sapkota
Published: over 4 years ago

Software Mentions 7

bioconductor: biomformat
An interface package for the BIOM file format
Papers that mentioned: 18
Very Likely Science (100)
bioconductor: metagenomeSeq
Statistical analysis for sparse high-throughput sequencing
Papers that mentioned: 169
Very Likely Science (100)
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
Very Likely Science (75)
cran: fossil
Palaeoecological and Palaeogeographical Analysis Tools
Papers that mentioned: 44
Very Likely Science (85)
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
Very Likely Science (100)
cran: pheatmap
Pretty Heatmaps
Papers that mentioned: 2,572
Very Likely Science (75)
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
Very Likely Science (100)