Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s40478-019-0797-0

https://doi.org/10.1186/s40478-019-0797-0

Extensive transcriptomic study emphasizes importance of vesicular transport in C9orf72 expansion carriers

Cited by: 36
Author(s): Dennis W. Dickson, Matthew Baker, Jazmyne L. Jackson, Mariely DeJesus-Hernandez, Ni Cole A. Finch, Shulan Tian, Michael G. Heckman, Cyril Pottier, Tania F. Gendron, Melissa E. Murray, Yingxue Ren, Joseph S. Reddy, Neill R. Graff‐Radford, Bradley F. Boeve, Ronald C. Petersen, David S. Knopman, Keith A. Josephs, Leonard Petrucelli, Björn Oskarsson, John W. Sheppard, Yan W. Asmann, Rosa Rademakers, Marka van Blitterswijk
Published: about 5 years ago

Software Mentions 9

bioconductor: ComplexHeatmap
Make Complex Heatmaps
Papers that mentioned: 565
cran: flashClust
Implementation of optimal hierarchical clustering
Papers that mentioned: 74
cran: glmnet
Lasso and Elastic-Net Regularized Generalized Linear Models
Papers that mentioned: 1,607
cran: randomForest
Breiman and Cutler's Random Forests for Classification and Regression
Papers that mentioned: 1,447
cran: VennDiagram
Generate High-Resolution Venn and Euler Plots
Papers that mentioned: 626
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479
pypi: analysis
Source code analysis of Python programs
Papers that mentioned: 2,036
pypi: glmnet
Python wrapper for glmnet
Papers that mentioned: 1,607
pypi: RSeQC
RNA-seq QC Package
Papers that mentioned: 366