Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1186/s40168-020-00961-3
https://doi.org/10.1186/s40168-020-00961-3
Cited by: 30
Author(s): Wang Ya, Yan Yan, Kelsey N. Thompson, Sena Bae, Emma K. Accorsi, Yancong Zhang, Jiaxian Shen, Hera Vlamakis, Erica M. Hartmann, Curtis Huttenhower
Published: over 3 years ago
Software Mentions 15
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census dataPapers that mentioned: 1,702
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of GraphicsPapers that mentioned: 11,441
cran: GUniFrac
Generalized UniFrac Distances, Distance-Based Multivariate Methods and Feature-Based Univariate Methods for Microbiome Data AnalysisPapers that mentioned: 91
cran: matrixStats
Functions that Apply to Rows and Columns of Matrices (and to Vectors)Papers that mentioned: 46
cran: PERMANOVA
Multivariate Analysis of Variance Based on Distances and PermutationsPapers that mentioned: 6,292
cran: phytools
Phylogenetic Tools for Comparative Biology (and Other Things)Papers that mentioned: 586
pypi: ape
A Productive Environment - make/rake/ant/fab-like system with support for FOSDPapers that mentioned: 918