Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s40168-020-00841-w

https://doi.org/10.1186/s40168-020-00841-w

Construction of habitat-specific training sets to achieve species-level assignment in 16S rRNA gene datasets

Cited by: 49
Author(s): Isabel F. Escapa, Yanmei Huang, Tsute Chen, Maoxuan Lin, Alexis Kokaras, Floyd E. Dewhirst, Katherine P. Lemon
Published: over 4 years ago

Software Mentions 5

bioconductor: dada2
Accurate, high-resolution sample inference from amplicon sequencing data
Papers that mentioned: 274
cran: MED
Mediation by Tilted Balancing
Papers that mentioned: 188
cran: RDP
The Ramer-Douglas-Peucker Algorithm
Papers that mentioned: 1,243
pypi: custom
Custom self carry
Papers that mentioned: 1,363
pypi: oligotyping
The oligotyping and minimum entropy decomposition (MED) pipeline for the analysis of marker gene amplicons
Papers that mentioned: 10