Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s40168-020-00805-0

https://doi.org/10.1186/s40168-020-00805-0

Domestication of Oryza species eco-evolutionarily shapes bacterial and fungal communities in rice seed

Cited by: 80
Author(s): Hyun Kim, Kiseok Keith Lee, Jongbum Jeon, William Harris, Yong-Hwan Lee
Published: almost 5 years ago

Software Mentions 11

cran: caret
Classification and Regression Training
Papers that mentioned: 630
cran: e1071
Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU Wien
Papers that mentioned: 419
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: PERMANOVA
Multivariate Analysis of Variance Based on Distances and Permutations
Papers that mentioned: 6,292
cran: phytools
Phylogenetic Tools for Comparative Biology (and Other Things)
Papers that mentioned: 586
cran: randomForest
Breiman and Cutler's Random Forests for Classification and Regression
Papers that mentioned: 1,447
cran: ROCR
Visualizing the Performance of Scoring Classifiers
Papers that mentioned: 596
pypi: caret
A Python Interface to Asterisk
Papers that mentioned: 630
pypi: ForceAtlas2
The ForceAtlas2 algorithm for Python (and NetworkX)
Papers that mentioned: 92
pypi: phytools
Useful tools for physicists.
Papers that mentioned: 586
pypi: stats
Calculator-style statistical functions
Papers that mentioned: 3,105