Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s40168-018-0535-z

https://doi.org/10.1186/s40168-018-0535-z

High-resolution ISR amplicon sequencing reveals personalized oral microbiome

Cited by: 30
Author(s): Chiranjit Mukherjee, Clifford J. Beall, Ann L. Griffen, Eugene J. Leys
Published: over 6 years ago

Software Mentions 9

bioconductor: dada2
Accurate, high-resolution sample inference from amplicon sequencing data
Papers that mentioned: 274
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
cran: gplots
Various R Programming Tools for Plotting Data
Papers that mentioned: 2,122
cran: GUniFrac
Generalized UniFrac Distances, Distance-Based Multivariate Methods and Feature-Based Univariate Methods for Microbiome Data Analysis
Papers that mentioned: 91
cran: ISR
The Iterated Score Regression-Based Estimation Algorithm
Papers that mentioned: 6
cran: randomForest
Breiman and Cutler's Random Forests for Classification and Regression
Papers that mentioned: 1,447
pypi: ISR
Image Super Resolution
Papers that mentioned: 6
pypi: script
Help for writing shell scripts in Python
Papers that mentioned: 575
pypi: stats
Calculator-style statistical functions
Papers that mentioned: 3,105