Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-021-02435-7

https://doi.org/10.1186/s13059-021-02435-7

DeTOKI identifies and characterizes the dynamics of chromatin TAD-like domains in a single cell

Cited by: 15
Author(s): Xiao Li, Guangjie Zeng, Angsheng Li, Zhihua Zhang
Published: over 3 years ago

Software Mentions 6

bioconductor: SpectralTAD
SpectralTAD: Hierarchical TAD detection using spectral clustering
Papers that mentioned: 5
cran: HiCseg
Detection of domains in HiC data
Papers that mentioned: 17
cran: IMP
Interactive Model Performance Evaluation
Papers that mentioned: 172
cran: TopDom
An Efficient and Deterministic Method for Identifying Topological Domains in Genomes
Papers that mentioned: 31
pypi: scikit-learn
A set of python modules for machine learning and data mining
Papers that mentioned: 2,431
pypi: sklearn
deprecated sklearn package, use scikit-learn instead
Papers that mentioned: 559