Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-020-02160-7

https://doi.org/10.1186/s13059-020-02160-7

Removing reference bias and improving indel calling in ancient DNA data analysis by mapping to a sequence variation graph

Cited by: 33
Author(s): Rui Martiniano, Erik Garrison, Eppie R. Jones, Andrea Manica, Richard Durbin
Published: about 4 years ago

Software Mentions 6

cran: circlize
Circular Visualization
Papers that mentioned: 260
pypi: bwa
Bwa: Simple Notification Sender(Discord, Slack, Gmail and Telegram)
Papers that mentioned: 989
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562
pypi: map
map applies a command to files/folders at a certain path.
Papers that mentioned: 56
pypi: vg
Linear algebra for humans: a very good vector-geometry and linear-algebra toolbelt
Papers that mentioned: 34
pypi: vt
VirusTotal Full API
Papers that mentioned: 24