Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-019-1764-6

https://doi.org/10.1186/s13059-019-1764-6

BERMUDA: a novel deep transfer learning method for single-cell RNA sequencing batch correction reveals hidden high-resolution cellular subtypes

Cited by: 94
Author(s): Tongxin Wang, Travis Johnson, Wei Shao, Zixiao Lu, Bryan R. Helm, Jie Zhang, Kun Huang
Published: over 5 years ago

Software Mentions 5

bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: MetaNeighbor
Single cell replicability analysis
Papers that mentioned: 11
cran: MMD
Minimal Multilocus Distance (MMD) for Source Attribution and Loci Selection
Papers that mentioned: 18
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
pypi: combat
pyComBat, a Python tool for batch effects correction in high-throughput molecular data using empirical Bayes methods
Papers that mentioned: 8