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Papers: 10.1186/s13059-018-1597-8

https://doi.org/10.1186/s13059-018-1597-8

plyranges: a grammar of genomic data transformation

Cited by: 62
Author(s): Stuart Lee, Dianne Cook, Michael C. Lawrence
Published: over 6 years ago

Software Mentions 9

bioconductor: GenomicRanges
Representation and manipulation of genomic intervals
Papers that mentioned: 323
Very Likely Science (90)
bioconductor: IRanges
Foundation of integer range manipulation in Bioconductor
Papers that mentioned: 62
Very Likely Science (75)
bioconductor: plyranges
A fluent interface for manipulating GenomicRanges
Papers that mentioned: 8
Very Likely Science (100)
bioconductor: rtracklayer
R interface to genome annotation files and the UCSC genome browser
Papers that mentioned: 107
Very Likely Science (90)
cran: dplyr
A Grammar of Data Manipulation
Papers that mentioned: 1,213
Very Likely Science (100)
cran: magrittr
A Forward-Pipe Operator for R
Papers that mentioned: 107
Very Likely Science (100)
cran: rlang
Functions for Base Types and Core R and 'Tidyverse' Features
Papers that mentioned: 16
Very Likely Science (100)
cran: valr
Genome Interval Arithmetic
Papers that mentioned: 4
Very Likely Science (100)
pypi: pybedtools
Wrapper around BEDTools for bioinformatics work
Papers that mentioned: 48
Very Likely Science (100)