Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12870-020-02814-5

https://doi.org/10.1186/s12870-020-02814-5

Integrated analysis of DNA methylome and transcriptome reveals epigenetic regulation of CAM photosynthesis in pineapple

Cited by: 8
Author(s): Yan Shi, Xingtan Zhang, Xiaojun Chang, Mei Yan, Hui Zhao, Yuan Qin, Haifeng Wang
Published: almost 4 years ago

Software Mentions 5

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: DMRcaller
Differentially Methylated Regions caller
Papers that mentioned: 6
cran: HMM
Hidden Markov Models
Papers that mentioned: 577
cran: metaplot
Data-Driven Plot Design
Papers that mentioned: 19
pypi: metaplot
metaplot
Papers that mentioned: 19