Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-018-5264-y

https://doi.org/10.1186/s12864-018-5264-y

Helmsman: fast and efficient mutation signature analysis for massive sequencing datasets

Cited by: 18
Author(s): Jedidiah Carlson, Jun Z. Li, Sebastian Zöllner
Published: about 6 years ago

Software Mentions 6

bioconductor: signeR
Empirical Bayesian approach to mutational signature discovery
Papers that mentioned: 9
bioconductor: SomaticSignatures
Somatic Signatures
Papers that mentioned: 32
cran: deconstructSigs
Identifies Signatures Present in a Tumor Sample
Papers that mentioned: 85
pypi: bgzip
Utilities working with blocked gzip streams.
Papers that mentioned: 16
pypi: nimfa
A Python module for nonnegative matrix factorization
Papers that mentioned: 3
pypi: scikit-learn
A set of python modules for machine learning and data mining
Papers that mentioned: 2,431