Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-018-4670-5

https://doi.org/10.1186/s12864-018-4670-5

Circular RNA expression and regulatory network prediction in posterior cingulate astrocytes in elderly subjects

Cited by: 28
Author(s): Shobana Sekar, Lori Cuyugan, Jonathan Adkins, Philipp Geiger, Winnie S. Liang
Published: over 6 years ago

Software Mentions 6

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: circ
A basic CLI to make mosaic vrts using ctx imagery
Papers that mentioned: 69
pypi: CIRCexplorer
A combined strategy to identify circular RNAs (circRNAs and ciRNAs)
Papers that mentioned: 99
pypi: find
find files and dirs
Papers that mentioned: 54
pypi: seqtk
seqtk provides various tools for Sequence.
Papers that mentioned: 213