Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-020-3475-0

https://doi.org/10.1186/s12859-020-3475-0

Cited by: 184
Author(s): Michael Gruenstaeudl, Nils Jenke
Published: almost 4 years ago

Software Mentions 9

bioconductor: BiocGenerics
S4 generic functions used in Bioconductor
Papers that mentioned: 15
bioconductor: Biostrings
Efficient manipulation of biological strings
Papers that mentioned: 220
bioconductor: genbankr
Parsing GenBank files into semantically useful objects
Papers that mentioned: 2
bioconductor: GenomicAlignments
Representation and manipulation of short genomic alignments
Papers that mentioned: 134
cran: optparse
Command Line Option Parser
Papers that mentioned: 15
cran: PACVr
Plastome Assembly Coverage Visualization
Papers that mentioned: 1
cran: RCircos
Circos 2D Track Plot
Papers that mentioned: 74
pypi: Circos
Circos plots in Python!
Papers that mentioned: 2,252
pypi: ORG.asm
A de novo assembler dedicated to organelle genome assembling
Papers that mentioned: 1