Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-016-1455-1

https://doi.org/10.1186/s12859-016-1455-1

MultiDataSet: an R package for encapsulating multiple data sets with application to omic data integration

Cited by: 20
Author(s): Carles Hernández-Ferrer, Carlos Ruiz‐Arenas, Alba Beltran-Gomila, Juan R. González
Published: almost 8 years ago

Software Mentions 14

bioconductor: Biobase
Biobase: Base functions for Bioconductor
Papers that mentioned: 104
bioconductor: GenomicRanges
Representation and manipulation of genomic intervals
Papers that mentioned: 323
bioconductor: GEOquery
Get data from NCBI Gene Expression Omnibus (GEO)
Papers that mentioned: 328
bioconductor: iClusterPlus
Integrative clustering of multi-type genomic data
Papers that mentioned: 32
bioconductor: made4
Multivariate analysis of microarray data using ADE4
Papers that mentioned: 86
bioconductor: mixOmics
Omics Data Integration Project
Papers that mentioned: 375
bioconductor: MultiAssayExperiment
Software for the integration of multi-omics experiments in Bioconductor
Papers that mentioned: 16
bioconductor: MultiDataSet
Implementation of MultiDataSet and ResultSet
Papers that mentioned: 5
bioconductor: omicade4
Multiple co-inertia analysis of omics datasets
Papers that mentioned: 12
bioconductor: RTopper
This package is designed to perform Gene Set Analysis across multiple genomic platforms
Papers that mentioned: 1
bioconductor: STATegRa
Classes and methods for multi-omics data integration
Papers that mentioned: 7
bioconductor: SummarizedExperiment
SummarizedExperiment container
Papers that mentioned: 52
cran: PMA
Penalized Multivariate Analysis
Papers that mentioned: 55
cran: RGCCA
Regularized and Sparse Generalized Canonical Correlation Analysis for Multiblock Data
Papers that mentioned: 13