Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: bioconductor: omicade4
https://packages.ecosyste.ms/registries/bioconductor.org/packages/omicade4
Multiple co-inertia analysis of omics datasets
1 version
Latest release: 12 months ago
5 dependent packages
22,066 downloads total
Papers Mentioning omicade4 12
10.3390/metabo9100200
The metaRbolomics Toolbox in Bioconductor and beyondCited by: 61
Author(s): Jan Stanstrup, Corey D. Broeckling, Rick Helmus, Nils Hoffmann, Ewy A. Mathé, Thomas Naake, Luca Nicolotti, Kristian Peters, Johannes Michael Rainer, Reza M. Salek, Tobias Schulze, Emma L. Schymanski, Michael A. Stravs, Etienne Thévenot, Hendrik Treutler, Ralf Weber, Egon Willighagen, Michael Witting, Steffen Neumann
Software Mentions: 92
Published: about 5 years ago
10.3389/fonc.2020.00423
Computational Oncology in the Multi-Omics Era: State of the ArtCited by: 55
Author(s): Guillermo de Anda-Jáuregui, Enrique Hernández‐Lemus
Software Mentions: 46
Published: over 4 years ago
10.1186/s12859-016-1455-1
MultiDataSet: an R package for encapsulating multiple data sets with application to omic data integrationCited by: 20
Author(s): Carles Hernández-Ferrer, Carlos Ruiz‐Arenas, Alba Beltran-Gomila, Juan R. González
Software Mentions: 14
Published: over 7 years ago
10.3389/fmicb.2018.00699
Tillage Changes Vertical Distribution of Soil Bacterial and Fungal CommunitiesCited by: 112
Author(s): Run‐Cang Sun, Wenyan Li, Wenxu Dong, Yinping Tian, Chunsheng Hu, Binbin Liu
Software Mentions: 4
Published: over 6 years ago
10.1186/1471-2105-15-162
A multivariate approach to the integration of multi-omics datasetsCited by: 214
Author(s): Chen Meng, Bernhard Küster, Aedín C. Culhane, Amin Moghaddas Gholami
Software Mentions: 3
Published: over 10 years ago
10.1186/s12920-015-0108-y
From big data analysis to personalized medicine for all: challenges and opportunitiesCited by: 366
Author(s): Akram Alyass, Michelle Turcotte, David Meyre
Software Mentions: 2
Published: over 9 years ago
10.3389/fmolb.2021.660456
Longitudinal Profiles of Dietary and Microbial Metabolites in Formula- and Breastfed InfantsCited by: 15
Author(s): Nina Sillner, Alesia Walker, Marianna Lucio, Tanja Maier, Monika Bazanella, Michael Rychlik, Dirk Haller, Philippe Schmitt‐Kopplin
Software Mentions: 1
Published: over 3 years ago
10.3389/fnmol.2021.695873
The Metallome as a Link Between the “Omes” in Autism Spectrum DisordersCited by: 7
Author(s): Janelle E. Stanton, Sigita Malijauskaite, Kieran McGourty, Andreas M. Grabrucker
Software Mentions: 1
Published: over 3 years ago
10.1038/srep37855
An integrated multi-omics analysis of the NK603 Roundup-tolerant GM maize reveals metabolism disturbances caused by the transformation processCited by: 56
Author(s): Robin Mesnage, Sarah Zanon Agapito-Tenfen, Vinicius Vilperte, George Renney, Malcolm Ward, Gilles‐Éric Séralini, Rubens Onofre Nodari, Michael Antoniou
Software Mentions: 1
Published: almost 8 years ago
10.1186/s12870-018-1239-z
Integrated omics data of two annual ryegrass (Lolium multiflorum L.) genotypes reveals core metabolic processes under drought stressCited by: 29
Author(s): Ling Pan, Chen Meng, Jianping Wang, Xiao Ma, Xiaomei Fan, Zhongfu Yang, Meiliang Zhou, Xinquan Zhang
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-020-59617-9
New insights into cheddar cheese microbiota-metabolome relationships revealed by integrative analysis of multi-omics dataCited by: 36
Author(s): Roya Afshari, Christopher J. Pillidge, Elizabeth S. Read, Simone Rochfort, Daniel A. Dias, A. Mark Osborn, Harsharn Gill
Software Mentions: 1
Published: over 4 years ago
10.1186/s40168-021-01142-6
Multi-omics reveals the positive leverage of plant secondary metabolites on the gut microbiota in a non-model mammalCited by: 16
Author(s): Le Wang, Guangping Huang, Rong Hou, Dunwu Qi, Qi Wu, Yonggang Nie, Zhenqiang Zuo, Rui Ma, Wenliang Zhou, Yingjie Ma, Yibo Hu, Yang Zhang, Yan Li, Fuwen Wei
Software Mentions: 1
Published: about 3 years ago