Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-015-0719-5

https://doi.org/10.1186/s12859-015-0719-5

mAPKL: R/ Bioconductor package for detecting gene exemplars and revealing their characteristics

Cited by: 3
Author(s): Αλέξανδρος Σακελλαρίου, George M. Spyrou
Published: over 9 years ago

Software Mentions 15

bioconductor: Biobase
Biobase: Base functions for Bioconductor
Papers that mentioned: 104
bioconductor: ClassifyR
A framework for cross-validated classification problems, with applications to differential variability and differential distribution testing
Papers that mentioned: 1
bioconductor: CMA
Synthesis of microarray-based classification
Papers that mentioned: 337
bioconductor: edge
Extraction of Differential Gene Expression
Papers that mentioned: 16
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: mAPKL
A Hybrid Feature Selection method for gene expression data
Papers that mentioned: 1
bioconductor: MLInterfaces
Uniform interfaces to R machine learning procedures for data in Bioconductor containers
Papers that mentioned: 10
bioconductor: multtest
Resampling-based multiple hypothesis testing
Papers that mentioned: 158
cran: e1071
Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU Wien
Papers that mentioned: 419
cran: igraph
Network Analysis and Visualization
Papers that mentioned: 1,555
cran: plsgenomics
PLS Analyses for Genomics
Papers that mentioned: 8
cran: randomForest
Breiman and Cutler's Random Forests for Classification and Regression
Papers that mentioned: 1,447
cran: samr
SAM: Significance Analysis of Microarrays
Papers that mentioned: 114
pypi: edge
Python bindings for Directed Edge's API
Papers that mentioned: 16
pypi: igraph
High performance graph data structures and algorithms
Papers that mentioned: 1,555