Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/1752-0509-6-133

https://doi.org/10.1186/1752-0509-6-133

CellNOptR: a flexible toolkit to train protein signaling networks to data using multiple logic formalisms

Cited by: 182
Author(s): Camille Terfve, Thomas Cokelaer, David Henriques, Aidan MacNamara, Emanuel Gonçalvès, Melody K. Morris, Martijn P. van Iersel, Douglas A. Lauffenburger, Julio Sáez-Rodríguez
Published: about 12 years ago

Software Mentions 7

bioconductor: CellNOptR
Training of boolean logic models of signalling networks using prior knowledge networks and perturbation data
Papers that mentioned: 25
bioconductor: CNORdt
Add-on to CellNOptR: Discretized time treatments
Papers that mentioned: 2
bioconductor: CNORfuzzy
Addon to CellNOptR: Fuzzy Logic
Papers that mentioned: 2
bioconductor: CNORode
ODE add-on to CellNOptR
Papers that mentioned: 5
cran: BoolNet
Construction, Simulation and Analysis of Boolean Networks
Papers that mentioned: 73
pypi: BooleanNet
Boolean Network Simulation Toolbox
Papers that mentioned: 41
pypi: vignette
Library to create FreeDesktop-compatible thumbnails
Papers that mentioned: 7