Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/1471-2164-15-786

https://doi.org/10.1186/1471-2164-15-786

A transcriptome resource for the koala (Phascolarctos cinereus): insights into koala retrovirus transcription and sequence diversity

Cited by: 47
Author(s): Matthew Hobbs, Ana Pavasovic, Andrew King, Peter J. Prentis, Mark D. B. Eldridge, Zhiliang Chen, Donald J. Colgan, Adam Polkinghorne, Marc R. Wilkins, Cheyne Flanagan, Amber Gillett, Jon Hanger, Rebecca N. Johnson, Peter Timms
Published: about 10 years ago

Software Mentions 8

bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: muscle
Multiple Sequence Alignment with MUSCLE
Papers that mentioned: 166
pypi: bwa
Bwa: Simple Notification Sender(Discord, Slack, Gmail and Telegram)
Papers that mentioned: 989
pypi: express
Safely process expressions and templates based on user input.
Papers that mentioned: 42
pypi: gmap
A package that prints 'Hello, World!'
Papers that mentioned: 64
pypi: muscle
Strength Training Program Generator
Papers that mentioned: 166
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017
pypi: tripal
Tripal library
Papers that mentioned: 2