Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/1471-2105-16-S11-S2

https://doi.org/10.1186/1471-2105-16-S11-S2

VisRseq: R-based visual framework for analysis of sequencing data

Cited by: 59
Author(s): Hamid Younesy, Torsten B. Möller, Matthew C. Lorincz, Mehdi Karimi, Steven J.M. Jones
Published: over 9 years ago

Software Mentions 15

bioconductor: affylmGUI
GUI for limma Package with Affymetrix Microarrays
Papers that mentioned: 30
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: limmaGUI
GUI for limma Package With Two Color Microarrays
Papers that mentioned: 21
bioconductor: OLINgui
Graphical user interface for OLIN
Papers that mentioned: 2
cran: CAST
'caret' Applications for Spatial-Temporal Models
Papers that mentioned: 219
cran: Deducer
A Data Analysis GUI for R
Papers that mentioned: 19
cran: fgui
Function GUI
Papers that mentioned: 1
cran: ggvis
Interactive Grammar of Graphics
Papers that mentioned: 7
cran: GrapheR
A Multi-Platform GUI for Drawing Customizable Graphs in R
Papers that mentioned: 2
cran: JGR
Java GUI for R
Papers that mentioned: 7
cran: Rserve
Binary R server
Papers that mentioned: 35
cran: shiny
Web Application Framework for R
Papers that mentioned: 127
pypi: Orange
Orange, a component-based data mining framework.
Papers that mentioned: 219
pypi: plot
A matplotlib frontend executable using JSON file as user input
Papers that mentioned: 63
pypi: shiny
A web development framework for Python.
Papers that mentioned: 127