Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1155/2021/6664386

https://doi.org/10.1155/2021/6664386

Hypoxia Molecular Characterization in Hepatocellular Carcinoma Identifies One Risk Signature and Two Nomograms for Clinical Management

Cited by: 23
Author(s): Xinwei Han, Long Liu, Taoyuan Lu, Libo Wang, Zhaonan Li, Dechao Jiao, Xinwei Han
Published: almost 4 years ago

Software Mentions 11

bioconductor: clusterProfiler
A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223
bioconductor: ConsensusClusterPlus
ConsensusClusterPlus
Papers that mentioned: 313
bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: sva
Surrogate Variable Analysis
Papers that mentioned: 511
cran: NbClust
Determining the Best Number of Clusters in a Data Set
Papers that mentioned: 181
cran: pROC
Display and Analyze ROC Curves
Papers that mentioned: 1,740
cran: RCircos
Circos 2D Track Plot
Papers that mentioned: 74
cran: rms
Regression Modeling Strategies
Papers that mentioned: 1,236
cran: timeROC
Time-Dependent ROC Curve and AUC for Censored Survival Data
Papers that mentioned: 254
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893