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Papers: 10.1128/mSystems.00903-19

https://doi.org/10.1128/mSystems.00903-19

manta: a Clustering Algorithm for Weighted Ecological Networks

Cited by: 7
Author(s): Lisa Röttjers, Karoline Faust
Published: over 6 years ago

Software Mentions 12

bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
Very Likely Science (75)
cran: igraph
Network Analysis and Visualization
Papers that mentioned: 1,555
Very Likely Science (100)
cran: MCL
Markov Cluster Algorithm
Papers that mentioned: 563
Very Likely Science (93)
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
Very Likely Science (100)
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479
Very Likely Science (85)
pypi: igraph
High performance graph data structures and algorithms
Papers that mentioned: 1,555
Very Likely Science (100)
pypi: manta
A Python SDK for Joyent's Manta service
Papers that mentioned: 14
Very Likely Science (65)
pypi: networkx
Python package for creating and manipulating graphs and networks
Papers that mentioned: 110
Very Likely Science (100)
pypi: numpy
Fundamental package for array computing in Python
Papers that mentioned: 832
Very Likely Science (100)
pypi: pandas
Powerful data structures for data analysis, time series, and statistics
Papers that mentioned: 640
Very Likely Science (100)
pypi: scikit-learn
A set of python modules for machine learning and data mining
Papers that mentioned: 2,431
Very Likely Science (100)
pypi: scipy
Fundamental algorithms for scientific computing in Python
Papers that mentioned: 1,071
Very Likely Science (100)