Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1128/mSystems.00590-19

https://doi.org/10.1128/mSystems.00590-19

Conditional Hfq Association with Small Noncoding RNAs in Pseudomonas aeruginosa Revealed through Comparative UV Cross-Linking Immunoprecipitation Followed by High-Throughput Sequencing

Cited by: 14
Author(s): Kotaro Chihara, Thorsten Bischler, Lars Barquist, Vivian Monzon, Naohiro Noda, Jörg Vogel, Satoshi Tsuneda
Published: almost 5 years ago

Software Mentions 3

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
pypi: ANNOgesic
ANNOgesic - A tool for bacterial/archaeal RNA-Seq based genome annotations
Papers that mentioned: 8
pypi: READemption
A RNA-Seq Analysis Pipeline
Papers that mentioned: 35