Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/molbev/msz058

https://doi.org/10.1093/molbev/msz058

Transmission Trees on a Known Pathogen Phylogeny: Enumeration and Sampling

Cited by: 14
Author(s): Matthew Hall, Caroline Colijn
Published: almost 6 years ago

Software Mentions 7

bioconductor: ggtree
an R package for visualization of tree and annotation data
Papers that mentioned: 474
cran: ade4
Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences
Papers that mentioned: 809
cran: apTreeshape
Analyses of Phylogenetic Treeshape
Papers that mentioned: 15
cran: STraTUS
Enumeration and Uniform Sampling of Transmission Trees for a Known Phylogeny
Papers that mentioned: 1
cran: TransPhylo
Inference of Transmission Tree from a Dated Phylogeny
Papers that mentioned: 25
cran: treespace
Statistical Exploration of Landscapes of Phylogenetic Trees
Papers that mentioned: 7
pypi: for

Papers that mentioned: 1,226