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Papers: 10.1093/molbev/msz058

https://doi.org/10.1093/molbev/msz058

Transmission Trees on a Known Pathogen Phylogeny: Enumeration and Sampling

Cited by: 14
Author(s): Matthew Hall, Caroline Colijn
Published: over 6 years ago

Software Mentions 7

bioconductor: ggtree
an R package for visualization of tree and annotation data
Papers that mentioned: 474
Very Likely Science (100)
cran: ade4
Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences
Papers that mentioned: 809
Very Likely Science (85)
cran: apTreeshape
Analyses of Phylogenetic Treeshape
Papers that mentioned: 15
Very Likely Science (85)
cran: STraTUS
Enumeration and Uniform Sampling of Transmission Trees for a Known Phylogeny
Papers that mentioned: 1
Very Likely Science (100)
cran: TransPhylo
Inference of Transmission Tree from a Dated Phylogeny
Papers that mentioned: 25
Very Likely Science (75)
cran: treespace
Statistical Exploration of Landscapes of Phylogenetic Trees
Papers that mentioned: 7
Very Likely Science (100)
pypi: for
Papers that mentioned: 1,226
Very Likely Science (65)