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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1093/jmcb/mjz094

https://doi.org/10.1093/jmcb/mjz094

A combined computational pipeline to detect circular RNAs in human cancer cells under hypoxic stress

Cited by: 20
Author(s): Antonella Di Liddo, Camila de Oliveira Freitas Machado, Sandra E. Fischer, Stefanie Ebersberger, Andreas W. Heumüller, Julia E. Weigand, Michaela Müller-McNicoll, Kathi Zarnack
Published: almost 6 years ago

Software Mentions 5

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
Very Likely Science (100)
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
Very Likely Science (100)
pypi: circ
A basic CLI to make mosaic vrts using ctx imagery
Papers that mentioned: 69
Very Likely Science (100)
pypi: CIRCexplorer
A combined strategy to identify circular RNAs (circRNAs and ciRNAs)
Papers that mentioned: 99
Very Likely Science (100)
pypi: find
find files and dirs
Papers that mentioned: 54
Very Likely Science (65)