Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/gigascience/giz064

https://doi.org/10.1093/gigascience/giz064

TuBA: Tunable biclustering algorithm reveals clinically relevant tumor transcriptional profiles in breast cancer

Cited by: 6
Author(s): Amartya Singh, Gyan Bhanot, Hossein Khiabanian
Published: over 5 years ago

Software Mentions 10

bioconductor: QUBIC
An R package for qualitative biclustering in support of gene co-expression analyses
Papers that mentioned: 26
cran: biclust
BiCluster Algorithms
Papers that mentioned: 19
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: igraph
Network Analysis and Visualization
Papers that mentioned: 1,555
cran: isa2
The Iterative Signature Algorithm
Papers that mentioned: 7
cran: plyr
Tools for Splitting, Applying and Combining Data
Papers that mentioned: 468
cran: SAMBA
Selection and Misclassification Bias Adjustment for Logistic Regression Models
Papers that mentioned: 97
pypi: igraph
High performance graph data structures and algorithms
Papers that mentioned: 1,555
pypi: ISA
ISA (Independent Statistics Aggregator) collects node statistics for a cluster of nodes.
Papers that mentioned: 137
pypi: plyr
UNKNOWN
Papers that mentioned: 468