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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1093/bioinformatics/btz889

https://doi.org/10.1093/bioinformatics/btz889

<i>CellBench</i>: <i>R/Bioconductor</i> software for comparing single-cell RNA-seq analysis methods

Cited by: 17
Author(s): Shian Su, Luyi Tian, Xueyi Dong, Peter Hickey, Saskia Freytag, Matthew E. Ritchie
Published: over 5 years ago

Software Mentions 11

bioconductor: CellBench
Construct Benchmarks for Single Cell Analysis Methods
Papers that mentioned: 7
Very Likely Science (100)
bioconductor: iCOBRA
Comparison and Visualization of Ranking and Assignment Methods
Papers that mentioned: 5
Very Likely Science (100)
bioconductor: rnaseqcomp
Benchmarks for RNA-seq Quantification Pipelines
Papers that mentioned: 2
Very Likely Science (100)
bioconductor: SingleCellExperiment
S4 Classes for Single Cell Data
Papers that mentioned: 36
Very Likely Science (75)
bioconductor: SummarizedBenchmark
Classes and methods for performing benchmark comparisons
Papers that mentioned: 3
Very Likely Science (79)
bioconductor: TSCAN
Tools for Single-Cell Analysis
Papers that mentioned: 49
Very Likely Science (100)
cran: DrImpute
Imputing Dropout Events in Single-Cell RNA-Sequencing Data
Papers that mentioned: 19
Very Likely Science (100)
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
Very Likely Science (100)
cran: RaceID
Identification of Cell Types, Inference of Lineage Trees, and Prediction of Noise Dynamics from Single-Cell RNA-Seq Data
Papers that mentioned: 25
Very Likely Science (75)
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
Very Likely Science (100)
cran: tidyverse
Easily Install and Load the 'Tidyverse'
Papers that mentioned: 1,023
Very Likely Science (100)