Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41598-020-59006-2

https://doi.org/10.1038/s41598-020-59006-2

Power and pitfalls of computational methods for inferring clone phylogenies and mutation orders from bulk sequencing data

Cited by: 19
Author(s): Sayaka Miura, Tracy Vu, Jiamin Deng, Tiffany Buturla, Olumide Oladeinde, Joongdae Choi, Sudhir Kumar
Published: almost 5 years ago

Software Mentions 4

bioconductor: Clomial

Infers clonal composition of a tumor
Papers that mentioned: 10

cran: Canopy

Accessing Intra-Tumor Heterogeneity and Tracking Longitudinal and Spatial Clonal Evolutionary History by Next-Generation Sequencing
Papers that mentioned: 41

cran: treespace

Statistical Exploration of Landscapes of Phylogenetic Trees
Papers that mentioned: 7

pypi: PyClone

Wraps rclone and provides an interface for an installation at the host or container level.
Papers that mentioned: 119