Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41421-021-00312-y

https://doi.org/10.1038/s41421-021-00312-y

A single-cell atlas of liver metastases of colorectal cancer reveals reprogramming of the tumor microenvironment in response to preoperative chemotherapy

Cited by: 42
Author(s): Li-Heng Che, Jingwen Li, Jian-Ping Huo, Rong Luo, Rui-Ming Xu, He Cai, Yuqing Li, Anni Zhou, Pinbo Huang, Yongyu Chen, Weijian Ni, Yunxia Zhou, Yuan-Yuan Liu, Huiyan Li, Rong Zhou, Ming Hui, Jianming Li
Published: over 3 years ago

Software Mentions 7

bioconductor: clusterProfiler
A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: monocle
Clustering, differential expression, and trajectory analysis for single- cell RNA-Seq
Papers that mentioned: 60
cran: circlize
Circular Visualization
Papers that mentioned: 260
cran: DDRTree
Learning Principal Graphs with DDRTree
Papers that mentioned: 42
pypi: CellPhoneDB
Inferring cell-cell communication.
Papers that mentioned: 89
pypi: monocle
An async programming framework with a blocking look-alike syntax
Papers that mentioned: 60