Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41421-020-00226-1

https://doi.org/10.1038/s41421-020-00226-1

Patient-derived SARS-CoV-2 mutations impact viral replication dynamics and infectivity in vitro and with clinical implications in vivo

Cited by: 68
Author(s): Hang‐Ping Yao, Xiangyun Lu, Qiong Chen, Kaijin Xu, Yu Chen, Ming-Hui Cheng, Keda Chen, Linfang Cheng, Tian-Hao Weng, Danrong Shi, Fumin Liu, Zhigang Wu, Mingjie Xie, Haibo Wu, Changzhong Jin, Min Zheng, Nanping Wu, Chao Jiang, Lanjuan Li
Published: about 4 years ago

Software Mentions 21

cran: cluster
"Finding Groups in Data": Cluster Analysis Extended Rousseeuw et al.
Papers that mentioned: 416
cran: corrplot
Visualization of a Correlation Matrix
Papers that mentioned: 1,077
cran: devtools
Tools to Make Developing R Packages Easier
Papers that mentioned: 157
cran: dplyr
A Grammar of Data Manipulation
Papers that mentioned: 1,213
cran: factoextra
Extract and Visualize the Results of Multivariate Data Analyses
Papers that mentioned: 650
cran: ggbeeswarm
Categorical Scatter (Violin Point) Plots
Papers that mentioned: 31
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: ggpmisc
Miscellaneous Extensions to 'ggplot2'
Papers that mentioned: 16
cran: ggpubr
'ggplot2' Based Publication Ready Plots
Papers that mentioned: 856
cran: ggrepel
Automatically Position Non-Overlapping Text Labels with 'ggplot2'
Papers that mentioned: 164
cran: ggsci
Scientific Journal and Sci-Fi Themed Color Palettes for 'ggplot2'
Papers that mentioned: 35
cran: gridExtra
Miscellaneous Functions for "Grid" Graphics
Papers that mentioned: 298
cran: Hmisc
Harrell Miscellaneous
Papers that mentioned: 1,000
cran: plyr
Tools for Splitting, Applying and Combining Data
Papers that mentioned: 468
cran: psych
Procedures for Psychological, Psychometric, and Personality Research
Papers that mentioned: 1,085
cran: RColorBrewer
ColorBrewer Palettes
Papers that mentioned: 490
cran: reshape2
Flexibly Reshape Data: A Reboot of the Reshape Package
Papers that mentioned: 421
cran: tidyverse
Easily Install and Load the 'Tidyverse'
Papers that mentioned: 1,023
pypi: cluster

Papers that mentioned: 416
pypi: devtools
Python's missing debug print command, and more.
Papers that mentioned: 157
pypi: plyr
UNKNOWN
Papers that mentioned: 468