Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41396-018-0251-5

https://doi.org/10.1038/s41396-018-0251-5

Cited by: 56
Author(s): Amanda C. Perofsky, Rebecca J. Lewis, Lauren Ancel Meyers
Published: almost 6 years ago

Software Mentions 12

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
cran: cluster
"Finding Groups in Data": Cluster Analysis Extended Rousseeuw et al.
Papers that mentioned: 416
cran: cowplot
Streamlined Plot Theme and Plot Annotations for 'ggplot2'
Papers that mentioned: 298
cran: fpc
Flexible Procedures for Clustering
Papers that mentioned: 99
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: indicspecies
Relationship Between Species and Groups of Sites
Papers that mentioned: 218
cran: PERMANOVA
Multivariate Analysis of Variance Based on Distances and Permutations
Papers that mentioned: 6,292
cran: randomForest
Breiman and Cutler's Random Forests for Classification and Regression
Papers that mentioned: 1,447
cran: samr
SAM: Significance Analysis of Microarrays
Papers that mentioned: 114
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
pypi: cluster

Papers that mentioned: 416