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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1038/s41396-018-0251-5

https://doi.org/10.1038/s41396-018-0251-5

Terrestriality and bacterial transfer: a comparative study of gut microbiomes in sympatric Malagasy mammals

Cited by: 56
Author(s): Amanda C. Perofsky, Rebecca J. Lewis, Lauren Ancel Meyers
Published: about 7 years ago

Software Mentions 12

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
Very Likely Science (100)
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
Very Likely Science (75)
cran: cluster
"Finding Groups in Data": Cluster Analysis Extended Rousseeuw et al.
Papers that mentioned: 416
Very Likely Science (85)
cran: cowplot
Streamlined Plot Theme and Plot Annotations for 'ggplot2'
Papers that mentioned: 298
Very Likely Science (83)
cran: fpc
Flexible Procedures for Clustering
Papers that mentioned: 99
Very Likely Science (75)
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
Very Likely Science (100)
cran: indicspecies
Relationship Between Species and Groups of Sites
Papers that mentioned: 218
Very Likely Science (93)
cran: PERMANOVA
Multivariate Analysis of Variance Based on Distances and Permutations
Papers that mentioned: 6,292
Very Likely Science (85)
cran: randomForest
Breiman and Cutler's Random Forests for Classification and Regression
Papers that mentioned: 1,447
Very Likely Science (100)
cran: samr
SAM: Significance Analysis of Microarrays
Papers that mentioned: 114
Very Likely Science (93)
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
Very Likely Science (100)
pypi: cluster
Simple clustering library for python.
Papers that mentioned: 416
Very Likely Science (80)