Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1016/j.csbj.2018.01.003

https://doi.org/10.1016/j.csbj.2018.01.003

Cited by: 184
Author(s): Chang Xu
Published: over 6 years ago

Software Mentions 9

bioconductor: deepSNV
Detection of subclonal SNVs in deep sequencing data.
Papers that mentioned: 26
bioconductor: SPLINTER
Splice Interpreter of Transcripts
Papers that mentioned: 16
cran: ART
Aligned Rank Transform for Nonparametric Factorial Analysis
Papers that mentioned: 580
cran: Platypus
Single-Cell Immune Repertoire and Gene Expression Analysis
Papers that mentioned: 218
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: Platypus
A minimal language
Papers that mentioned: 218
pypi: SomVarIUS
A Python utility for calling somatic mutations from a BAM or SAM file
Papers that mentioned: 6
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017