Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1016/j.cell.2019.07.038
https://doi.org/10.1016/j.cell.2019.07.038
Cited by: 237
Author(s): Anna-Lena Van de Weyer, Freddy Monteiro, Oliver J. Furzer, Marc T. Nishimura, Volkan Çevik, Kamil Witek, Jonathan D. G. Jones, Jeffery L. Dangl, Detlef Weigel, Felix Bemm
Published: almost 5 years ago
Software Mentions 23
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
bioconductor: karyoploteR
Plot customizable linear genomes displaying arbitrary dataPapers that mentioned: 50
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of GraphicsPapers that mentioned: 11,441
cran: HyPhy
Macroevolutionary phylogentic analysis of species trees and gene treesPapers that mentioned: 722
cran: PerformanceAnalytics
Econometric Tools for Performance and Risk AnalysisPapers that mentioned: 93
cran: PopGenome
An Efficient Swiss Army Knife for Population Genomic AnalysesPapers that mentioned: 62
cran: UpSetR
A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting SetsPapers that mentioned: 319
pypi: SNPmatch
A simple python library to identify the most likely strain given the SNPs for a samplePapers that mentioned: 3