pypi: topaz
A plotting package for the Aurora simulations using pynbody
Papers that mentioned: 2
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pypi: Stencil
Creates files and directories from templates
Papers that mentioned: 2
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pypi: plumed
Python interface to PLUMED
Papers that mentioned: 2
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pypi: preflight
Checks that a site has been deployed correctly
Papers that mentioned: 2
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pypi: hmeasure
H-Measure Classification Metric
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pypi: phconvert
Convert Beker&Hickl, PicoQuant and other formats to Photon-HDF5.
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pypi: total
Simple AWK tasks, made awesome
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pypi: nss
Simple and fast database operation
Papers that mentioned: 2
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pypi: popt
Tool for converting Robot Framework xml output to a human-readable log file
Papers that mentioned: 2
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cran: decoder
Decode Coded Variables to Plain Text and the Other Way Around
Papers that mentioned: 2
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pypi: sdic
Asynchronous soft constraints executed against you databases
Papers that mentioned: 2
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cran: stylo
Stylometric Multivariate Analyses
Papers that mentioned: 2
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pypi: shuffle
Simulate Human Card Shuffling Techniques for use with Python Lists
Papers that mentioned: 2
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pypi: nolds
Nonlinear measures for dynamical systems (based on one-dimensional time series)
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pypi: predator
Optimizable seed extraction from metabolic networks
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cran: subniche
Within Outlying Mean Indexes: Refining the OMI Analysis
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pypi: pyhsmm
Bayesian inference in HSMMs and HMMs
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pypi: spass
Simple and Secure passphrases
Papers that mentioned: 2
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pypi: cpca
Chinese Province, City and Area Recognition Utilities
Papers that mentioned: 2
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cran: spex
Spatial Extent Tools
Papers that mentioned: 2
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pypi: PyLDM
Python Based Lifetime Density Analysis of Time-Resolved Ultrafast Data
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pypi: signtest
UNKNOWN
Papers that mentioned: 2
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pypi: tran
方便在终端中译英和英译中的小工具
Papers that mentioned: 2
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pypi: pygr
Pygr, a Python graph-database toolkit oriented primarily on bioinformatics applications
Papers that mentioned: 2
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pypi: ctr
Concatenate files w/ headers.
Papers that mentioned: 2
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pypi: obonet
Parse OBO formatted ontologies into networkx
Papers that mentioned: 2
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cran: greta
Simple and Scalable Statistical Modelling in R
Papers that mentioned: 2
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pypi: pyglmnet
Elastic-net regularized generalized linear models.
Papers that mentioned: 2
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cran: fishtree
Interface to the Fish Tree of Life API
Papers that mentioned: 2
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cran: FSAdata
Data to Support Fish Stock Assessment ('FSA') Package
Papers that mentioned: 2
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pypi: pymaid
A rpc framework based on gevent/protobuf
Papers that mentioned: 2
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pypi: pymatch
Matching techniques for Observational Studies
Papers that mentioned: 2
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pypi: demuxEM
demuxEM is the demultiplexing module of Pegasus
Papers that mentioned: 2
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pypi: Serv
Init system abstraction API and CLI
Papers that mentioned: 2
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pypi: tau
Time series database
Papers that mentioned: 2
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pypi: dbt
The dbt Cloud CLI - an ELT tool for running SQL transformations and data models in dbt Cloud.
Papers that mentioned: 2
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pypi: AMDock
AMDock: Assisted Molecular Docking with Autodock4 and Autodock Vina
Papers that mentioned: 2
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cran: broom.mixed
Tidying Methods for Mixed Models
Papers that mentioned: 2
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cran: FiSh
Fisher-Shannon Method
Papers that mentioned: 2
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pypi: irf
irf
Papers that mentioned: 2
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pypi: dcode
A URL scheme to share code
Papers that mentioned: 2
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cran: tagcloud
Tag Clouds
Papers that mentioned: 2
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pypi: pymorphy2
Morphological analyzer (POS tagger + inflection engine) for Russian language.
Papers that mentioned: 2
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pypi: Propeller
A lightweight HTTP framework written in Python
Papers that mentioned: 2
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pypi: pymrmr
Python3 binding to mRMR Feature Selection algorithm
Papers that mentioned: 2
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pypi: grabseqs
Easily download reads from next-gen sequencing repositories like NCBI SRA
Papers that mentioned: 2
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cran: broman
Karl Broman's R Code
Papers that mentioned: 2
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pypi: iscc
ISCC: Reference Implementation
Papers that mentioned: 2
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pypi: isatools
Metadata tracking tools help to manage an increasingly diverse set of life science, environmental and biomedical experiments
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pypi: NanoSim-H
NanoSim-H: a simulator of Oxford Nanopore reads; a fork of NanoSim.
Papers that mentioned: 2
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pypi: DAFI
Ensemble based data-assimilation and field inversion.
Papers that mentioned: 2
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cran: TBEST
Tree Branches Evaluated Statistically for Tightness
Papers that mentioned: 2
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pypi: great
"A ratings aggregator"
Papers that mentioned: 2
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cran: brm
Binary Regression Model
Papers that mentioned: 2
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pypi: neuroCombat
ComBat algorithm for harmonizing multi-site imaging data
Papers that mentioned: 2
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pypi: grain
Simple, extensible test assertions.
Papers that mentioned: 2
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cran: FAMoS
A Flexible Algorithm for Model Selection
Papers that mentioned: 2
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pypi: Polarity
Mass downloader for streaming platforms
Papers that mentioned: 2
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pypi: preprocessing
pre-processing package for text strings
Papers that mentioned: 2
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bioconductor: HiLDA
Conducting statistical inference on comparing the mutational exposures of mutational signatures by using hierarchical latent Dirichlet allocation
Papers that mentioned: 2
Very Likely Science (100)
pypi: NRCLex
An affect generator based on TextBlob and the NRC affect lexicon. Note that lexicon license is for research purposes only.
Papers that mentioned: 2
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bioconductor: MetaVolcanoR
Gene Expression Meta-analysis Visualization Tool
Papers that mentioned: 2
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pypi: PyDAQmx
Interface to the National Instruments PyDAQmx driver
Papers that mentioned: 2
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pypi: G-plot
ploat chart with gsheet
Papers that mentioned: 2
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pypi: treehouse
High-performance tree traversal
Papers that mentioned: 2
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pypi: neuro
Python client for using npu api
Papers that mentioned: 2
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bioconductor: nethet
A bioconductor package for high-dimensional exploration of biological network heterogeneity
Papers that mentioned: 2
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pypi: ItClust
An Iterative Transfer learning algorithm for scRNA-seq Clustering
Papers that mentioned: 2
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cran: scSorter
Implementation of 'scSorter' Algorithm
Papers that mentioned: 2
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pypi: seqfile
Find the next file in a sequence of files in a thread-safe way.
Papers that mentioned: 2
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cran: InterVA5
Replicate and Analyse 'InterVA5'
Papers that mentioned: 2
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pypi: pycm
Multi-class confusion matrix library in Python
Papers that mentioned: 2
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pypi: Speedometer
Console monitor of the rate of data across a network connection or data being stored in a file.
Papers that mentioned: 2
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pypi: spektral
Graph Neural Networks with Keras and TensorFlow.
Papers that mentioned: 2
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cran: mkin
Kinetic Evaluation of Chemical Degradation Data
Papers that mentioned: 2
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cran: textcat
N-Gram Based Text Categorization
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bioconductor: CNORdt
Add-on to CellNOptR: Discretized time treatments
Papers that mentioned: 2
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pypi: sfm
Collection of useful single file module.
Papers that mentioned: 2
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pypi: pyranges
GenomicRanges for Python.
Papers that mentioned: 2
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pypi: v3d
A 3D vector library for basic Vector operations.
Papers that mentioned: 2
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pypi: properties
properties: an organizational aid and wrapper for validation and tab completion of class properties
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pypi: sphere
Geometry on the sphere
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pypi: Pyrebase
A simple python wrapper for the Firebase API
Papers that mentioned: 2
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pypi: scorer
Multi-class scorer computation library.
Papers that mentioned: 2
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pypi: TripleStore
Pure Python 3 triplestore for arbitrary entity relations.
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pypi: pyclustering
pyclustring is a python data mining library
Papers that mentioned: 2
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bioconductor: ClusterSignificance
The ClusterSignificance package provides tools to assess if class clusters in dimensionality reduced data representations have a separation different from permuted data
Papers that mentioned: 2
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pypi: waffle
Waffle - A Dependency-Injection-based application framework for Python
Papers that mentioned: 2
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pypi: pyscenic
Python implementation of the SCENIC pipeline for transcription factor inference from single-cell transcriptomics experiments.
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pypi: voxel
voxel
Papers that mentioned: 2
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pypi: pinnacle
Pinnacle API Python wrapper
Papers that mentioned: 2
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pypi: kaplan
A computer-assisted translation tool package
Papers that mentioned: 2
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pypi: nw
Association mining
Papers that mentioned: 2
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pypi: PySide2
Python bindings for the Qt cross-platform application and UI framework
Papers that mentioned: 2
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pypi: pyfastx
pyfastx is a python module for fast random access to sequences from plain and gzipped FASTA/Q file
Papers that mentioned: 2
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pypi: nvidia-smi
A package for easing return of multiple values
Papers that mentioned: 2
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pypi: ventilator
some description of how we made a ventilator
Papers that mentioned: 2
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pypi: lasagna
A Python web framework
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pypi: pycddlib
pycddlib is a Python wrapper for Komei Fukuda's cddlib.
Papers that mentioned: 2
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pypi: Empiric
Empiric!, an easy-to-use framework to conduct empirical experiments, with a particular focus on geospatial data perception and contribution
Papers that mentioned: 2
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