Projects: bioconductor: spatialDE
https://packages.ecosyste.ms/registries/bioconductor.org/packages/spatialDE
R wrapper for SpatialDE
2 versions
Latest release: over 2 years ago
2,418 downloads total
Enhanced Analysis
Educational Contributors:
dlu2@caltech.edu
jennifer.wokaty@sph.cuny.edu
Repository Activity:
Repository Owner:
Sales Lab (organization)
Academic
README Analysis:
DOI Found
Science Score: 100/100
Starting Score: 100 points
Bonuses:
-
+40
Educational commit emails
2 contributors with educational email addresses -
+20
Academic repository owner
Repository owned by academic institution -
+15
Institutional repository owner
Repository owned by research institution -
+4
Science terms in README
2 scientific terms found in README -
+30
DOI references
3 DOI references found in README -
+6
Academic links
1 academic links found in README
Penalties:
-
-15
No science keywords
No scientific terms found in keywords/classifiers -
-10
No science terms in description
No scientific terms found in description
Very Likely Science (100)
Papers Mentioning spatialDE 2
10.1186/s13059-021-02286-2
Giotto: a toolbox for integrative analysis and visualization of spatial expression dataCited by: 290
Author(s): Ruben Dries, Qi Zhu, Rui Dong, Chee-Huat Linus Eng, Huipeng Li, Kan Liu, Yuntian Fu, Tianxiao Zhao, Arpan Sarkar, Feng Bao, Rani E. George, Nico Pierson, Long Cai, Guo‐Cheng Yuan
Software Mentions: 9
Published: about 5 years ago
10.1038/s41598-020-60384-w
Spatial modeling of prostate cancer metabolic gene expression reveals extensive heterogeneity and selective vulnerabilitiesCited by: 38
Author(s): Yuliang Wang, Shuyi Ma, Walter L. Ruzzo
Software Mentions: 1
Published: over 6 years ago