pypi projects 9,932
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pypi: pragma
Python code transformers that mimic pragma compiler directivesPapers that mentioned: 2
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pypi: nibble
Speed, distance and time calculations around quantities of digital information.Papers that mentioned: 2
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pypi: exo
Quality Control and Visualization utilities for Yeast Epigenome ProjectPapers that mentioned: 2
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pypi: cgptoolbox
A toolbox for causally cohesive genotype-phenotype modelingPapers that mentioned: 2
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pypi: igv_plotter
python interface to IGV that simplifies creating screenshots of BAMs, VCFs, BEDs, etc for one-off spot checking or automated / scripted image collectionPapers that mentioned: 2
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pypi: cfncluster
A simple tool to launch and manage HPC clusters as CloudFormation stacks.Papers that mentioned: 2
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pypi: prospector
Prospector is a tool to analyse Python code by aggregating the result of other tools.Papers that mentioned: 2
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pypi: gplearn
Genetic Programming in Python, with a scikit-learn inspired APIPapers that mentioned: 2
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pypi: downloader
Download URLs using a compressed disk cache and a random throttling interval.Papers that mentioned: 2
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pypi: COVERnant
A tool to generate and manipulate coverage plots of high-throughput sequencing data.Papers that mentioned: 2
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pypi: Scimitar
Scimitar is an implementation of ISO Schematron that compiles a Schematron schema into a Python validator script.Papers that mentioned: 2
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pypi: Jinja
A small but fast and easy to use stand-alone template engine written in pure python.Papers that mentioned: 2
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pypi: MyTARDIS
Next iteration of the TARDIS framework. No digital repository required. Federated web stores + ftp access instead.Papers that mentioned: 2
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pypi: looper
A pipeline submission engine that parses sample inputs and submits pipelines for each sample.Papers that mentioned: 2
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pypi: mygrid
A package to represent a electric grid topology with extensions to make power flow and short circuit analysisPapers that mentioned: 2
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pypi: jicbioimage
Python package designed to make it easy to work with bio images.Papers that mentioned: 2
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pypi: olympus
A tool for creating a REST API for any machine learning model, in seconds.Papers that mentioned: 2
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pypi: put
collection of wonderful python utilities and tools that can make your life easierPapers that mentioned: 2
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pypi: pvacseq
Personalized Variant Antigens by Cancer Sequencing (pVAC-Seq)Papers that mentioned: 2
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pypi: Dialogs
Handles natural language inputs and outputs on cognitive robotsPapers that mentioned: 2
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pypi: py4j
Enables Python programs to dynamically access arbitrary Java objectsPapers that mentioned: 2
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pypi: paco
Small utility library for coroutine-based asynchronous generic programmingPapers that mentioned: 2
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pypi: Preferences
It a simple class that creates a list of dictionarries to store preferences as key value pairs. You can use the class directly or load the preferences from files. The main reason I wrote it was to create an easy way of storing more than one preference with the same name and load them form files in a manner that allows for easy appending or replacing of parmeters that could have been loaded from a default prameter file. There are also several methods to make managing the preferences easier.Papers that mentioned: 2
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pypi: Owlready
A module for ontology-oriented programming in Python: load OWL 2.0 ontologies as Python objects, modify them, save to OWL XML, and perform reasoning via HermiT. It can also generate dialog boxes for editing instances.Papers that mentioned: 2
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pypi: NRCLex
An affect generator based on TextBlob and the NRC affect lexicon. Note that lexicon license is for research purposes only.Papers that mentioned: 2
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pypi: co2sys
Papers that mentioned: 2
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pypi: spacegraphcats
tools for biological assembly graph neighborhood analysisPapers that mentioned: 2
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pypi: Pweave
Scientific reports with embedded python computations with reST, LaTeX or markdownPapers that mentioned: 2
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