Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: workflow

https://packages.ecosyste.ms/registries/pypi.org/packages/workflow

Simple workflows for Python
10 versions
Latest release: almost 6 years ago
288,514 downloads last month

Papers Mentioning workflow 9

The Firegoose: two-way integration of diverse data from different bioinformatics web resources with desktop applications
Cited by: 33
Author(s): J. Christopher Bare, Paul Shannon, Amy K. Schmid, Nitin S. Baliga
Software Mentions: 4
Published: about 17 years ago

10.1186/s12859-015-0812-9

QQ-SNV: single nucleotide variant detection at low frequency by comparing the quality quantiles
Cited by: 5
Author(s): Koen Van der Borght, Kim Thys, Yves Wetzels, Lieven Clement, Bie Verbist, Joke Reumers, Herman van Vlijmen, Jeroen Aerssens
Software Mentions: 3
Published: about 9 years ago

10.3390/biom11060843

Nucleoside Analogues Are Potent Inducers of Pol V-mediated Mutagenesis
Cited by: 2
Author(s): Balagra Kasim Sumabe, Synnøve Brandt Ræder, Lisa Marie Røst, Animesh Sharma, Eric S Donkor, Lydia Mosi, Samuel Duodu, Per Bruheim, Marit Otterlei
Software Mentions: 3
Published: over 3 years ago

10.1128/MRA.01589-19

Genome Sequences of vB_RleM_RL38JI and vB_RleM_RL2RES, Two Virulent Rhizobium leguminosarum Transducing Phages
Cited by: 1
Author(s): K. M. Damitha Gunathilake, Supriya V. Bhat, Christopher K. Yost, Michael F. Hynes
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0177643

Environmental DNA (eDNA) metabarcoding assays to detect invasive invertebrate species in the Great Lakes
Cited by: 116
Author(s): Katy E. Klymus, Nathaniel T. Marshall, Carol A. Stepien
Software Mentions: 1
Published: over 7 years ago

10.3389/fnins.2018.00256

Childhood Emotional Abuse Moderates Associations Among Corticomotor White Matter Structure and Stress Neuromodulators in Women With and Without Depression
Cited by: 5
Author(s): Carlton P. Frost, M. Elizabeth Meyerand, Rasmus M. Birn, Roxanne M. Hoks, Erin C. Walsh, Heather C. Abercrombie
Software Mentions: 1
Published: over 6 years ago

10.3390/genes12091440

Genetic Variants and Somatic Alterations Associated with MITF-E318K Germline Mutation in Melanoma Patients
Cited by: 2
Author(s): Elisabetta Vergani, Simona Frigerio, Matteo Dugo, Andrea Devecchi, Erika Feltrin, Loris De Cecco, Viviana Vallacchi, Mara Cossa, Lorenza Di Guardo, Siranoush Manoukian, Bernard Peissel, Andrea Ferrari, Gianfrancesco Gallino, Andrea Maurichi, Licia Rivoltini, Marialuisa Sensi, Monica Rodolfo
Software Mentions: 1
Published: about 3 years ago

10.1186/s13321-016-0169-8

Multi-level meta-workflows: new concept for regularly occurring tasks in quantum chemistry
Cited by: 3
Author(s): Junaid Arshad, Alexander Hoffmann, Sandra Gesing, Richard Grunzke, Jens Krüger, Tamás Kiss, Sonja Herres‐Pawlis, Gábor Terstyánszky
Software Mentions: 1
Published: about 8 years ago

10.1038/s41597-020-0497-4

A synthesis of bacterial and archaeal phenotypic trait data
Cited by: 48
Author(s): Joshua S. Madin, Daniel A. Nielsen, Maria Brbić, Ross Corkrey, David Danko, Kyle F. Edwards, Martin K. M. Engqvist, Noah Fierer, Jemma L. Geoghegan, Michael R. Gillings, Nikos C. Kyrpides, Elena Litchman, Christopher E. Mason, Lisa R. Moore, Søren Laurentius Nielsen, Ian T. Paulsen, Nathan D. Price, T. B. K. Reddy, Matthew A. Richards, Eduardo P. C. Rocha, Thomas M. Schmidt, Heba Shaaban, Maulik Shukla, Fran Supek, Sasha G. Tetu, Sara Vieira-Silva, Alice R. Wattam, David A. Westfall, Mark Westoby
Software Mentions: 1
Published: over 4 years ago